Dr Andreas Hoppe
Faculties, deparments and locations
- Faculty of Engineering, Computing and the Environment
- Department of Networks and Digital Media
- School of Computer Science and Mathematics
- Penrhyn Road
Senior Lecturer
- Email:
- a.hoppe@kingston.ac.uk
About
I am senior lecturer in the areas of computer science and games development. My research interests are in teaching and learning technologies as well as in digital imaging for quantitative microscopy.
Qualifications
- PhD
- BSc (Hons)
Domains
My research is in the field of bio-imaging. This encompasses research in algorithms and techniques for the segmentation and tracking of live cell-imaging sequences as well as the computer aided analysis of spatio-temporal properties of individual cells and cell clusters.
Publications
Proceedings of the Thirteenth Annual Conference: Medical Image Understanding and Analysis
(2009). (BMVA)
Proceedings of the British Machine Vision Conference 2004
(2005). Malvern, U.K.: (British Machine Vision Association)
ECM degradation in the 'Drosophila' abdominal epidermis initiates tissue growth that ceases with rapid cell-cycle exit
Davis, John Robert, Ainslie, Anna P., Williamson, John J., Ferreira, Ana, Torres-Sánchez, Alejandro, Hoppe, Andreas, Mangione, Federica, Smith, Matthew B., Martin-Blanco, Enrique, Salbreux, Guillaume and Tapon, Nicolas, 2022, Current Biology (32), 6, pp 1285-1300
Tissue fluidity promotes epithelial wound healing
Tetley, Robert J., Staddon, Michael F., Heller, Davide, Hoppe, Andreas, Banerjee, Shiladitya and Mao, Yanlan, 2019, Nature Physics (15), 11, pp 1195-1203
Apical and basal matrix remodeling control epithelial morphogenesis
Diaz-de-la-Loza, Maria-del-Carmen, Ray, Robert P., Ganguly, Poulami S., Alt, Silvanus, Davis, John R., Hoppe, Andreas, Tapon, Nic, Salbreux, Guillaume and Thompson, Barry J., 2018, Developmental Cell (46), 1, pp 23-39.e5
Incorporating spatial information for microaneurysm detection in retinal images
Habib, Mohammed, Welikala, Roshan, Hoppe, Andreas, Owen, Christopher G., Rudnicka, Alicja R., Tufail, Adnan, Egan, Catherine and Barman, Sarah A., 2017, Advances in Science, Technology and Engineering Systems Journal (2), 3, pp 642-649
Detection of microaneurysms in retinal images using an ensemble classifier
Habib, M.M., Welikala, R.A., Hoppe, A., Owen, C.G., Rudnicka, A.R. and Barman, S.A., 2017, Informatics in Medicine Unlocked (9), pp 44-57
EpiTools : an open-source image analysis toolkit for quantifying epithelial growth dynamics
Heller, Davide, Hoppe, Andreas, Restrepo, Simon, Gatti, Lorenzo, Tournier, Alexander L., Tapon, Nicolas, Basler, Konrad and Mao, Yanlan, 2016, Developmental Cell (36), 1, pp 103-116
Genetic algorithm based feature selection combined with dual classification for the automated detection of proliferative diabetic retinopathy
Welikala, R.A., Fraz, M.M., Dehmeshki, J., Hoppe, A., Tah, V., Mann, S., Williamson, T.H. and Barman, S.A., 2015, Computerized Medical Imaging and Graphics (43), pp 64-77
Automated detection of proliferative diabetic retinopathy using a modified line operator and dual classification
Welikala, R.A., Dehmeshki, J., Hoppe, A., Tah, V., Mann, S., Williamson, T.H. and Barman, S. A., 2014, Computer Methods and Programs in Biomedicine (114), 3, pp 247-261
Mucosal Vaccination against Tuberculosis Using Inert Bioparticles
Reljic, Rajko, Sibley, Laura, Huang, Jen-Min, Pepponi, Ilaria, Hoppe, Andreas, Hong, Huynh A. and Cutting, Simon M., 2013, Infection And Immunity (81), 11, pp 4071-4080
Novel automated tracking analysis of particles subjected to shear flow: kindlin-3 role in B cells
Willenbrock, Frances, Zicha, Daniel, Hoppe, Andreas and Hogg, Nancy, 2013, Biophysical Journal (105), 5, pp 1110-1122
Quantification of blood vessel calibre in retinal images of multi-ethnic school children using a model based approach
Fraz, M. M., Remagnino, P., Hoppe, A., Rudnicka, A. R., Whincup, P.H., Owen, C. G. and Barman, S.A., 2013, Computerized Medical Imaging and Graphics (37), 1, pp 48-60
Differential proliferation rates generate patterns of mechanical tension that orient tissue growth
Mao, Y., Tournier, A.L., Hoppe, A., Kester, L., Thompson, B.J. and Tapon, N., 2013, The EMBO Journal (32), 21, pp 2790-2803
An approach to localize the retinal blood vessels using bit planes and centerline detection
Fraz, M. M., Barman, S. A., Remagnino, P., Hoppe, A., Basit, A., Uyyanonvara, B., Rudnicka, A. R. and Owen, C. G., 2012, Computer Methods and Programs in Biomedicine (108), 2, pp 600-616
Blood vessel segmentation methodologies in retinal images: a survey
Fraz, M.M., Remagnino, P., Hoppe, A., Uyyanonvara, B., Rudnicka, A.R., Owen, C.G. and Barman, S.A., 2012, Computer Methods and Programs in Biomedicine (108), 1, pp 407-433
An ensemble classification based approach applied to retinal blood vessel segmentation
Fraz, M.M., Remagnino, P., Hoppe, A., Uyyanonvara, B., Rudnicka, A.R., Owen, C.G. and Barman, S.A., 2012, IEEE Transactions on Biomedical Engineering (59), 9, pp 2538-2548
The regulation of trophoblast migration across endothelial cells by low shear stress: consequences for vascular remodelling in pregnancy
James, Joanna L., Cartwright, Judith E., Whitley, Guy S., Greenhill, Darrel R. and Hoppe, Andreas, 2012, Cardiovascular Research (93), 1, pp 152-161
Histogram-based motion segmentation and characterisation of focal liver lesions in CEUS
Bakas, Spyridon, Chatzimichail, Katerina, Hoppe, Andreas, Galariotis, Vasileios, Hunter, Gordon and Makris, Dimitrios, 2012, Annals of the BMVA (2012), 7, pp 1-14
Performance assessment of semantic information search and linkage engine using ontology
John, B., Khaddaj, S. and Hoppe, A., 2011, International Journal of Computing Technology and Information Security (1), 1, pp 24-29
Software metrics for the evaluation of semantic web applications
John, Biju, Khaddaj, Souheil and Hoppe, Andreas, 2010, Journal of Algorithms and Computational Technology (4), 4, pp 511-522
Novel shear flow assay provides evidence for non-linear modulation of cancer invasion
Hagglund, Samuel, Hoppe, Andreas, Aubyn, Deborah, Cavanna, Tamara, Jordan, Peter and Zicha, Daniel, 2009, Frontiers in Bioscience (14), pp 3085-3093
Live cell image analysis of cell-cell interactions reveals the specific targeting of vascular smooth muscle cells by fetal trophoblasts
Hamzic, E., Cartwright, J.E., Keogh, R.J., Whitley, G. St. J., Greenhill, D. and Hoppe, A., 2008, Experimental Cell Research (314), 7, pp 1455-1464
Segmentation of microscope images of living cells
Korzynska, Anna, Strojny, Wojciech, Hoppe, Andreas, Wertheim, David and Hoser, Pawel, 2007, (10), 4, pp 301-319
Analysis of skin wound images using digital colour image processing: A preliminary communication
Oduncu, Hakan, Hoppe, Andreas, Clark, Michael, Williams, Robert J. and Harding, Keith G., 2004, The International Journal of Lower Extremity Wounds (3), 3, pp 151-156
Robust and automated unimodal histogram thresholding and potential applications
Baradez, M-O., McGuckin, C.P., Forraz, N., Pettengell, R. and Hoppe, A., 2004, Pattern Recognition (37), 6, pp 1131-1148
Interactive image processing system for assessment of cell movement
Hoppe, A., Wertheim, D., Jiang, W.G., Williams, R. and Harding, K., 1999, (37), 1, pp 419-423
A system for computer analysis of cancer cell movement
Hoppe, A., Jiang, W.G., Wertheim, D., Williams, R.J. and Harding, K.G., 1998, Anticancer Research (18), 4A, pp 2691-2694
Ensemble classification system applied for retinal vessel segmentation on child images containing various vessel profiles
Fraz, M.M., Remagnino, P., Hoppe, A., Uyyanonvara, B., Rudnicka, A.R., Owen, C.G. and Barman, S.A. (2012). In: Campilho, Aurélio, (eds.) and Kamel, Mohamed, (eds.), Image Analysis and Recognition. Berlin: Springer, pp 380-389
Retinal Vessel Extraction Using First-Order Derivative of Gaussian and Morphological Processing
Fraz, M.M., Remagnino, P., Hoppe, A., Uyyanonvara, B., Owen, Christopher G, Rudnicka, Alicja R and Barman, S. (2011). In: Bebis, George, (eds.), Boyle, Richard, (eds.), Parvin, Bahram, (eds.), Koracin, Darko, (eds.), Wang, Song, (eds.), Kyungnam, Kim, (eds.), Benes, Bedrich, (eds.), Moreland, Kenneth, (eds.), Borst, Christoph, (eds.), DiVerdi, Stephen, (eds.), Yi-Jen, Chiang, (eds.) and Ming, Jiang, (eds.), Advances in Visual Computing. Springer Berlin Heidelberg, pp 410-420
Microaneurysm detection in retinal images using an ensemble classifier
Habib, M.M., Welikala, R.A., Hoppe, A., Owen, C.G., Rudnicka, A.R. and Barman, S.A.(2016). In: 6th International Conference of Image Processing Theory Tools and Applications (IPTA), 12 - 15 Dec 2016 :Oulu, Finland
Differing matched filter responsivity for the detection of proliferative diabetic retinopathy
Welikala, Roshan A., Tah, Vikas, Williamson, Tom H., Hoppe, Andreas, Dehmeshki, Jamishid and Barman, Sarah(2014). In: Computer Graphics and Imaging / 798: Signal Processing, Pattern Recognition and Applications (CGIM 2013), 12-14 Feb 2013 :Innsbruck, Austria
The DFrame: Parallel programming using a distributed framework implemented in MPI.
Mclay, Tony, Hoppe, Andreas, Greenhill, Darrel R. and Khaddaj, Souheil(2013). 2-4 Sept. 2013 : Los Alamitos, CA, U.S.A.
Retinal image analysis aimed at extraction of vascular structure using linear discriminant classifier
Fraz, M.M., Remagnino, P., Hoppe, A. and Barman, S.(2013). In: IEEE International Conference on Computer Medical Applications (ICCMA), 20-22 Jan. 2013 :Sousse, Tunisia
A Model Based Approach for Vessel Caliber Measurement in Retinal Images
Fraz, M.M., Remagnino, P., Hoppe, A., Barman, S.A., Rudnicka, A., Owen, C. and Whincup, P.(2012). In: Eighth International Conference on Signal Image Technology and Internet Based Systems (SITIS), 25-29 Nov 2012 :Sorrento, Italy
Focal liver lesion tracking in CEUS for characterisation based on dynamic behaviour
Bakas, S., Hoppe, A., Chatzimichail, K, Galariotis, V, Hunter, G. and Makris, D.(2012). In: 8th International Symposium on Visual Computing (ISVC), 16-18 July 2012 :Rethymnon, Crete, Greece
Retinal vessel segmentation using ensemble classifier of bagged decision trees
Fraz, M. M., Remagnino, P., Hoppe, A., Uyyanonvara, B., Rudnicka, A., Owen, C. G. and Barman, S. A.(2012). In: IET Conference on Image Processing (IPR 2012), 03 - 04 Jul 2012 :London, U.K.
A supervised method for retinal blood vessel segmentation using line strength multiscale gabor and morphological features
Fraz, Muhammad Moazam, Remagnino, Paolo, Hoppe, Andreas, Velastin, Sergio A. and Barman, Sarah(2011). In: IEEE International Conference on Signal and Image Processing Applications, 16 - 18 Nov 2011 :Kuala Lumpur, Malaysia
Retinal vasculature segmentation by morphological curvature, reconstruction and adapted hysteresis thresholding
Fraz, M. Moazam, Basit, Abdul, Remagnino, Paolo, Hoppe, Andreas and Barman, Sarah(2011). In: IEEE International Conference on Emerging Technologies, 05 - 06 Sep 2011 :Islamabad, Pakistan
Localisation and characterisation of focal liver lesions using contrast-enhanced ultrasonographic visual cues
Bakas, Spyridon, Chatzimichail, Katerina, Autret, Awen, Hoppe, Andreas, Galariotis, Vasileios and Makris, Dimitrios(2011). In: Medical Image Understanding and Analysis, 14-15 July 2011 :London, U.K.
Developing imaging-based invasion assays
Zicha, D. and Hoppe, A.(2011). In: 11th International ELMI Meeting on Advanced Light Microscopy, 7-10 Jun 2010 :Alexandroupolis, Greece
Invasion of metastatic cells into monolayers of endothelial cells analysed directly with shear flow in vitro
Zicha, Daniel, Hoppe, Andreas, Aubyn, Deborah and Jordan, Peter(2009). In: NCRI Cancer Conference, 4 - 7 Oct 2009 :Birmingham, U.K.
Accelerating user satisfaction in semantic e-commerce
John, B., Khaddaj, Souheil and Hoppe, A.(2009). In: Second International Conference on the Applications of Digital Information and Web Technologies, 04 - 06 Aug 2009 :London, U.K.
An object model for the management of digital images
Khaddaj, S. and Hoppe, Andreas(2009). In: 11th International Conference on Enterprise Information Systems, 6 May - 10 May 2009 :Milan, Italy
A distributed imaging framework to extract, analyse and visualize cell features in multi-dimensional bio-image datasets
McLay, Tony, Hoppe, Andreas, Greenhill, Darrel R. and Khaddaj, Souheil(2009). In: International Symposium on Distributed Computing and Applications to Business, Engineering and Science, 16 - 19 Oct 2009 :Wuhan,Hubei, China
Thresholding based on linear diffusion for feature segmentation
Baradez, M-O. and Hoppe, A.(2003). In: British Machine Vision Conference, 8 Sept - 11 Sept 2003 :Norwich, U.K.
Computer assisted assessment of wound appearance using digital imaging
Hoppe, A., Wertheim, D., Melhuish, J., Morris, H., Harding, K.G. and Williams, R.(2001). In: 23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 25 Oct - 28 Oct 2001 :Istanbul, Turkey
A spline based method for assessment of wound images
Hoppe, A., Wertheim, D., Melhuish, J., Harding, K.G. and Williams, R.J.(2000). In: 1st International Conference on Advances in Medical Signal and Information Processing, 4-6 Sep 2000 :Bristol, UK
Adaptive spline method for extracting Ca2+ and morphological measurements from motile human neutrophils
Hoppe, A., Hallett, M.B., Dewitt, S. and Wertheim, D.(2000). In: Medical Image Understanding and Analysis, 4th annual conference, Jul 2000 :London, UK
A computer system for the analysis of neutrophil movement
Hoppe, A., Korzynska, A. and Wertheim, D.(1999). 04 - 07 Nov 1999 : Vienna, Austria